CDS

Accession Number TCMCG017C28592
gbkey CDS
Protein Id OMO65530.1
Location complement(join(230253..230445,230968..231257,231426..231705,231889..232562,232994..233161,233496..234662))
GeneID InterPro:IPR012890
Organism Corchorus olitorius
locus_tag COLO4_31201

Protein

Length 923aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01020828.1
Definition GC-rich sequence DNA-binding factor [Corchorus olitorius]
Locus_tag COLO4_31201

EGGNOG-MAPPER Annotation

COG_category K
Description PAX3- and PAX7-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13211        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000122        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000978        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0000982        [VIEW IN EMBL-EBI]
GO:0000987        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001078        [VIEW IN EMBL-EBI]
GO:0001227        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030371        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0042023        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0045182        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCAGCAGCAACAGAGCCAAAAACTTCCGCCGCCGTGGCGATAACGCCGATGACGACGACACTAATGAAGATAAAAATACCCCAACCACCGCCACCGCTACTAAAAAACCCTCATCTTCGAAACCCACCGCCAAGAAACCCCCGAAGCTCCTAAGTTTCGCCGACGATGAAACCGAAGAAGAAACACCGACACCATCCTCGAATAGAAACAGAGATAAAGAAAAACCCCTTTCCTCTCGCTTCTCGAAACCCTCATCTTCTGCCCACAAGATTACTTCCTCCAAAGACCGCAAAACCGCCTCTTCTGTTTTGCCTTCCAATGTCCAACCTCAAGCTGGGACTTACACCAAAGAAGCATTGCTTGAGCTCCAAAAGAACACGCGCACCCTTGCCGCCCCTTCCTCACGCGCTTCCTCCGTCTCATCTGAGCCTAAGATTGTCCTCAAAGGCCTTCTCAAGCCCCAATCTCAAAGTTTAAACGCAGAGCCGGATATTGGTCCTCAAGAGAATCTTGATAAAGATGAAACGGAGTCTCGGTTGGCCACTATGGCAATTGGTAAAGGGGCGGATTTGGATGGTTCAGATTTTCCAGACCAGGCAACTATTGATGCAATCAAGGCCAAGAAGGACCGGGCTCGCAAGTCGTTTGTAAGGCCTGCTCCTGATTATATATCATTGGATAGCGGGGGCAATCATGGTAGTGCTATAGAAGAAGAGTTGAGTGATGAGGAGCCAGAGTTTCGAGGGCGGTTGTTTGGTGAAAGTGGGAAAAAGGGTGTTTTTGAGGTTGTTGAAGACAGAGCAGTGGGTGTAGTTTCGAGGAAAGATGAGATTAATGATGAGGATGAGGATGAAGAGGAGAAGATGTGGGAAGAAGAGCAGGTCAGGAAAGGATTGGGGAAGAGGATGGATGATGCTACTAATCGGGTTGTTAGCACTAGAACTAATGGTGTTGGAGTTTCTGTGGCTCATAATATGCAGCAGCATGGGTATGGGTATTCTACAGTGAGCTCATATGGTTCAATGATGCCTAGCATATCACCAGCTCCTCCTTCCAGCATTGTTGGAGCAGCTGGGCCTTCTCAAGGTTTAGATGCTATGTCGATGTCTCAACAAGCTGAGATTGCTAAGAAAGCTTTACAAGATAATGTTCGGAGGCTTAAGGAATCTCATGACAGAACCATTTCGTCATTGACAAAGGCTGATGAGAACTTGTCAGCCTCACTTTTCAATATCACAGCTCTTGAAAAGTCTCTATCTGCCGCTGGTGAGAAGTTCATCTTTATGCAAAAGCTTCGTGATTTTGTTTCTGTTATATGTGAATTTTTGCAGCATAAAGCTCCCCTTATTGAGGAACTTGAAGAGCACATGCAGAAACTTAATCAAGAACGTGCATCAGCTGTCTTAGAAAGAAGATCTGCAAATAATGATGATGAGATGGTGGAGGTTGAAGCAGCCGTGAAAGCAGCAATGTTGGTTTTCAAGGAACGTGGAAACAATGCTGCAGCGATCGAATATGCCGCAAAGGAAGCTCAGGCTGCATCTGCTAGGGGGCAAGCAAATTTACCAGTCAAGTTAGATGAATTTGGTAGAGATGTAAACCGACAGAAACGTTTAGATATGGAACGGAGGGCTGAGGCTCGTAAACACAGGAAAGCTCGATTCGATTCAAAGAGATTATCATCCATGGAAATTGACAGTTCCTATCAGAAAATAGAAGGAGAATCAAGCACCGATGAGAGTGATAGTGAGAGTACAGCATACCAGTCAAACCGTGAGATGTTGCTTCAGACAGCTGATGAAATTTTCAGTGATGCTTCTGAGGAATTTTCCCAACTTTCTGCTGTTAAAGAGAGGTTTGAAAGATGGAAGAAAGATTATGCTTCAAGCTACCGTGATGCTTACATGTCATTAAGTATCCCTGCTATCTTCTCTCCATATGTAAGACTAGAGCTTCTTAAGTGGGACCCGCTCCATGGTGATGAAGACTTTTCTGATATGAAATGGCATAATTTGCTGTTCAATTATGGTTTTCCAGAAGATGGAAATTTCGCCCCTGATGATGCTGATGCTAACCTTGTTCCTGCACTAGTGGAGAAGGTTGCACTTCCAGTATTGCATCATGATATTTCCCATTGCTGGGACATTCTCAGCACGCAAGAAACAAAGAGTGCTGTTTCTGCCACAAGTTTGATTATAGATTATGTCCCTGCTTCTAGTGAGGCTTTAGCAGAACTATTACTTACTATCCGCACCCGTCTAAGTGATGCTGTTGCCGATTTAATGGTCCCAACATGGACCCCACTCGTGATGAAGGCTGTGCCAAATGCTGCCCGAATTGCTGCATATCGGTTTGGGATGTCTGTTCGTTTGATGAGAAATATCTGCTTGTGGAAGGAAATCCTGGCATTGCCTGTTTTAGAGAAGCTTGCTCTTGATGAGCTTTTGTATGGAAAAATTTTGCCTCATGTTAAAAACATTAGTTCAGATGTTCATGATGCTGTCACAAGAACAGAACGTATTATAGTTTCTTTGTCAGGGGTGTGGTCAGGCACAAATGTCAGACAAGATTCCAGTCGCAAGTTGCAGCCACTGGTGGACTATGTTTTGTCGTTAGGGAAAACATTGGAGGGAAGGCATGCATCAGGTGTGACTGAAAGTGAAGCTGGTGGACTAGCTCGTAGGTTGAAGAAAATGTTGGTTGAGCTCAATGAGTATGATAGTGCCAGGGATATAGCTAGGAGGTTCCATCTCAAGGAAGCATTATGA
Protein:  
MSSSNRAKNFRRRGDNADDDDTNEDKNTPTTATATKKPSSSKPTAKKPPKLLSFADDETEEETPTPSSNRNRDKEKPLSSRFSKPSSSAHKITSSKDRKTASSVLPSNVQPQAGTYTKEALLELQKNTRTLAAPSSRASSVSSEPKIVLKGLLKPQSQSLNAEPDIGPQENLDKDETESRLATMAIGKGADLDGSDFPDQATIDAIKAKKDRARKSFVRPAPDYISLDSGGNHGSAIEEELSDEEPEFRGRLFGESGKKGVFEVVEDRAVGVVSRKDEINDEDEDEEEKMWEEEQVRKGLGKRMDDATNRVVSTRTNGVGVSVAHNMQQHGYGYSTVSSYGSMMPSISPAPPSSIVGAAGPSQGLDAMSMSQQAEIAKKALQDNVRRLKESHDRTISSLTKADENLSASLFNITALEKSLSAAGEKFIFMQKLRDFVSVICEFLQHKAPLIEELEEHMQKLNQERASAVLERRSANNDDEMVEVEAAVKAAMLVFKERGNNAAAIEYAAKEAQAASARGQANLPVKLDEFGRDVNRQKRLDMERRAEARKHRKARFDSKRLSSMEIDSSYQKIEGESSTDESDSESTAYQSNREMLLQTADEIFSDASEEFSQLSAVKERFERWKKDYASSYRDAYMSLSIPAIFSPYVRLELLKWDPLHGDEDFSDMKWHNLLFNYGFPEDGNFAPDDADANLVPALVEKVALPVLHHDISHCWDILSTQETKSAVSATSLIIDYVPASSEALAELLLTIRTRLSDAVADLMVPTWTPLVMKAVPNAARIAAYRFGMSVRLMRNICLWKEILALPVLEKLALDELLYGKILPHVKNISSDVHDAVTRTERIIVSLSGVWSGTNVRQDSSRKLQPLVDYVLSLGKTLEGRHASGVTESEAGGLARRLKKMLVELNEYDSARDIARRFHLKEAL